Structure information

A2A receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

5OLV

SPECIES

Homo sapiens

RESOLUTION

2.000

PREFERRED CHAIN

A

REFERENCE

10.1038/S41598-017-18570-W

PUBLICATION DATE

Jan. 17, 2018

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
CHEMBL1671936 I66 2.64x63 TM2 hydrophobic
CHEMBL1671936 F168 45.52x52 ECL2 polar (hydrogen bond with backbone)
CHEMBL1671936 F168 45.52x52 ECL2 Van der Waals
CHEMBL1671936 F168 45.52x52 ECL2 aromatic (face-to-face)
CHEMBL1671936 M177 5.38x40 TM5 Van der Waals
CHEMBL1671936 M177 5.38x40 TM5 hydrophobic
CHEMBL1671936 W246 6.48x48 TM6 Van der Waals
CHEMBL1671936 L249 6.51x51 TM6 hydrophobic
CHEMBL1671936 L249 6.51x51 TM6 Van der Waals
CHEMBL1671936 H250 6.52x52 TM6 aromatic (face-to-edge)
CHEMBL1671936 H250 6.52x52 TM6 Van der Waals
CHEMBL1671936 N253 6.55x55 TM6 Van der Waals
CHEMBL1671936 N253 6.55x55 TM6 polar (hydrogen bond)
CHEMBL1671936 L267 7.32x31 TM7 hydrophobic
CHEMBL1671936 L267 7.32x31 TM7 Van der Waals
CHEMBL1671936 Y271 7.36x35 TM7 Van der Waals
CHEMBL1671936 Y271 7.36x35 TM7 hydrophobic
CHEMBL1671936 I274 7.39x38 TM7 Van der Waals
CHEMBL1671936 I274 7.39x38 TM7 hydrophobic

Ligands

CHEMBL1671936

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

V N G L I A L V A I A L E V T I Y V S S 1 V S L A A A D I A V G L V A I P F A I T I 2 A L L S F I S S Q T L V L V F C A I F L 3 A K G I I A I C W V L S F A I G L T P M 4 Y V G L M L L L P V L V C A F F N F Y V M Y 5 A I I V G L F A L C W L P L H I I N C F 6 F P N V V S N T H S L V I A L Y M L W 7
Download: PNG | SVG
ICL1 S N L Q ICL1ECL1 F C A ECL1ICL2 P L R Y N G L V ICL2ECL2 W N N C G Q P K E G K N H S Q G C G E G Q V A C L F E D V V ECL2ICL3 Q P L P G ICL3ECL3 P D C S H A ECL3C-term K A A G T S A R V L A A H G S D G E Q V S L R L N G H P P G V W A N G S A P H P E R R P N G Y A L G L V S G G S A Q E S Q G N T G L P D V E L L S H E L K G V C P E P P G L D D P L A Q D G A G V S C-term M P I M G S S V Y I T V E L A I A V L A I L G N V L V C W A V W L N N V T N Y F V V S L A A A D I A V G V L A I P F A I T I S T G A C H G C L F I A C F V L V L T Q S S I F S L L A I A I D R Y I A I R I T G T R A K G I I A I C W V L S F A I G L T P M L G P M N Y M V Y F N F F A C V L V P L L L M L G V Y L R I F L A A R R Q L K Q M E S E R A R S T L Q K E V H A A K S L A I I V G L F A L C W L P L H I I N C F T F F C P L W L M Y L A I V L S H T N S V V N P F I Y A Y R I R E F R K H V L P F F R Q T I I R S R Q Q E
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
A2A receptor
TM2
2x63 2.64x63 I66
ECL2
45x52 45.52x52 F168
TM5
5x40 5.38x40 M177
TM6
6x48 6.48x48 W246
6x51 6.51x51 L249
6x52 6.52x52 H250
6x55 6.55x55 N253
TM7
7x31 7.32x31 L267
7x35 7.36x35 Y271
7x38 7.39x38 I274